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Althaus F., Williams A., Schlacher T.A., Kloser R.K., Green, M.A., Barker B.A., Bax N.J., Brodie P., Schlacher-Hoenlinger M.A. (2009) Impacts of bottom trawling on deep-coral ecosystems of seamounts are long-lasting. Marine Ecology Progress Series, 397, 279-294. doi:10.3354/meps08248 open access
Anderson, T.J., Syms, C., Roberts, D.A. and Howard, D. (2009). Multi-scale fish–habitat associations and the use of habitat surrogates to predict the organisation and abundance of deep-water fish assemblages. Journal of Experimental Marine Biology and Ecology. 379 (1-2): 34-42. doi:10.1016/j.jembe.2009.07.033 abstract
Anderson, T.J., and M.M. Yoklavich. (2007). Multiscale habitat associations of deepwater demersal fishes off central California. Fisheries Bulletin. 105:168-179. http://swfsc.noaa.gov/news.aspx?id=12374
Anderson, T., Brooke, B., Radke, L., McArthur, M., and Hughes, M. 2009. Mapping and characterising soft-sediment habitats, and evaluating physical variables as surrogates of biodiversity in Jervis Bay, NSW. Geoscience Australia, Record 2009/10. Geoscience Australia, Canberra. 43pp. http://www.ga.gov.au/image_cache/GA14300.pdf
Barrett, N.S., Buxton, C.D. and Edgar, G.J. (2009) Changes in invertebrate and macroalgal populations within Tasmanian marine reserves in the decade following protection. Journal of Experimental Marine Biology and Ecology Vol. 370, pp. 104-119. doi:10.1016/j.jembe.2008.12.005 abstract
Boyd, C., Brooks, T.M., Butchart, S.H.M., Edgar, G.J., da Fonseca, G.A.B., Hawkins, F., Hoffmann, M., Sechrest, W., Stuart, S.N. & van Dijk, P.P. (2008) Spatial scale and the conservation of threatened species. Conservation Letters, Vol 1. 37-43. doi:10.1111/j.1755-263X.2008.00002.x open access 09/10
Brooke, B., Nichol, S., Hughes, M., McArthur, M., Anderson, T., Przeslawski, R., Siwabessy, J., Heyward, A., Battershill, C., Colquhoun, J., and Doherty, P. 2009. Carnarvon Shelf Survey Post-cruise Report. Geoscience Australia, Record 2009/02. Geoscience Australia, Canberra. 91pp. http://www.ga.gov.au/image_cache/GA13723.pdf
Carpenter, K.E., Livingstone, S.R., Abrar, M., Aeby, G., Aronson, R.B., Banks, S., Bruckner, A., Chiriboga, A., Cortés, J., Delbeek, J.C., DeVantier, L., Edgar, G.J., Edwards, A.J., Fenner, D., Guzman, H.M., Hoeksema, B.W., Hodgson, G., Johan, O., Licuanan, W.Y., Lovell, E.R., Moore, J.A., Obura, D.A., Ochavillo, D., Polidoro, B.A., Precht, W.F., Quibilan, M.C., Reboton, C., Richards, Z.T., Rogers, A.D., Sanciangco, J., Sheppard, A., Sheppard, C., Smith, J., Stuart, S., Turak, E., Veron, J.E.N., Wallace, C., Weil, E. & Wood, E. (2008) One third of reef-building corals face elevated extinction risk from climate change and local impacts. Science (Wash.), Vol 321, 560-563. doi: 10.1126/science.1159196 abstract
Clark, M.R., Rowden A.A., Schlacher T., Williams A., Consalvey M., Stocks K.I., Rogers A.D., O’Hara T.D., White M., Shank T.M., Hall-Spencer J.M. (2010) The ecology of seamounts: structure, function, and human impacts. Annual Reviews in Marine Science, 2, 253-278 abstract
Clark, M.R., Franziska Althaus, Alan Williams, Edwin Niklitschek, Gui M. Menezes, Nils-Roar Hareide, Philip Sutton, Ciaran O’Donnell. (submitted) Global variation in deep-sea fish communities on seamounts. Marine Ecology
Courtney, A.J., Schemel, B.L , Wallace, R., Campbell, M.J., Mayer, D.G. and Young, B. (2009). Reducing the impact of Queensland’s trawl fisheries on protected sea snakes. (Project No. 2005/053) Appendix 4 & 5. Canberra: Fisheries Research and Development Corporation.
Donlan, C.J. and C. Wilcox. (in press). Offsets for bycatch: practical suggestions not panaceas. Frontiers in Ecology and the Environment.
Donlan, C.J. and C. Wilcox. (2008). Integrating invasive mammal eradications and biodiversity offsets for fisheries bycatch: conservation opportunities and challenges for seabirds and sea turtles Biological Invasions, 10: 1053-1060. doi:10.1007/s10530-007-9183-0 open access
Donlan, C.J. and C. Wilcox. (2007). Compensatory mitigation: the authors reply. Frontiers in Ecology and the Environment, 5: 521-522.
Dunstan, P.K. and Foster, S.D. (In Revision) RAD Biodiversity: Prediction of rank abundance distributions from deep water benthic assemblages.
Dunstan, P.K. and Foster, S.D. and Darnell, R. (In Review.) Model Based Grouping of Species across Environmental Gradients.
Edgar G.J., Barrett N.S. and Stuart-Smith R.D. (2009). Exploited reefs protected from fishing transform over decades into conservation features not otherwise present in the seascape. Ecological Applications, 19(8), 2009:1967–1974. abstract
Edgar, G.J. and Stuart-Smith, R.D. (2009). Ecological effects of marine protected areas on rocky reef communities: a continental-scale analysis. Marine Ecology Progress Series. doi:10.3354/meps08149 abstract
Edgar, G.J., Langhammer, P.F., Allen, G., Brooks, T.M., Brodie, J., Crosse, W., De Silva, N., Fishpool, L., Foster, M.N., Knox, D., McCosker, J.E., McManus, R., Miller, A., & Mugo, R. (2008) Key Biodiversity Areas as globally significant target sites for the conservation of marine biological diversity. Aquatic Conservation: Marine and Freshwater Ecosystem, Vol. 18, pp. 969-983.doi:10.1002/aqc.902 abstract
Edgar, G.J., Banks, S., Bensted-Smith, R., Calvopiña, M., Chiriboga, A., Garske, L.E., Henderson, S., Miller, K.A., & Salazar, S. (2008) Conservation of threatened species in the Galapagos Marine Reserve through identification and protection of marine Key Biodiversity Areas. Aquatic Conservation: Marine and Freshwater Ecosystems, Vol. 18, pp. 955-968. doi:10.1002/aqc.901 abstract
Foster, Scott and Dunstan, Piers. (2009). The analysis of biodiversity using rank abundance distributions, Biometrics, DOI: 10.1111/j.1541-0420.2009.01263.x. abstract
England, P.R., Condie, S., Feng, M. and Slawinski, D. (Nov 2009) Modelling connectivity for resilient protected area design among areas for further assessment identified by DEWHA for the development of a Commonwealth MPA Network in the South-west Marine Region. Report to DEWHA. CSIRO Marine & Atmospheric Research / CSIRO Wealth from Oceans Flagship, Hobart.
Harris, P.T.(in press). On marine ecosystem disturbance regimes, benthic habitat characterisation and applications for environmental management: a physical sedimentological perspective. In: Shelf Processes. International Association of Sedimentologists, Special Publication.
Harris, P.T., Heap, A.D., Anderson, T.J. and Brooke, B. (2009). Comment on: Williams et al (2009) “Australia’s deep-water reserve network: implications of false homogeneity for classifying abiotic surrogates of biodiversity” ICES Journal of Marine Science. 66:214-224. doi:10.1093/icesjms/fsp207 abstract
Harris, P.T., Whiteway, T., 2009. High Seas Marine Protected Areas: benthic environmental conservation priorities from a GIS analysis of global ocean biophysical data. Ocean and Coastal Management 52, 22-38. :doi:10.1016/j.ocecoaman.2008.09.009 abstract
Harris, P.T., Heap, A.D., Whiteway, T., Post, A.L., 2008. Application of biophysical information to support Australia’s representative marine protected area program. Ocean and Coastal Management 51, 701-711. doi:10.1016/j.ocecoaman.2008.07.007 abstract
Harris, P.T., and Whiteway, T., 2008. Global ocean conservation priorities for benthic ecosystems identified by GIS analysis of multiple spatial data layers. GEOHAB – Marine Geological and Biological Habitat Mapping, Ninth International Symposium, 29th April – 2nd May 2008, Sitka Alaska. Abstracts, p. 46.
Hawkins S.J., Sugden H.E., Mieszkowska N., Moore P.J., Poloczanska E., Leaper R., Herbert R.J.H., Genner M.J., Moschella P.S., Thompson R.C., Jenkins S.R., Southward A.J., Burrows M.T. (2009) Consequences of climate-driven biodiversity changes for ecosystem functioning of North European rocky shores. Mar Ecol Prog Ser 396:245-259 doi:10.3354/meps08378 open access
Heap, A.D., Harris, P.T., 2008. Geomorphology of the Australian margin and adjacent seafloor. Australian Journal of Earth Science 55, 555-584. doi:10.1080/08120090801888669 abstract
Huang, Z., Nichol, S., Daniell, J., Siwabessy, J. & Brooke, B. (2009) Predictive Modelling of Seabed Sediment Parameters Using Multibeam Acoustic Data: A Case Study on the Carnarvon Shelf, Western Australia. In Lees, B.G. & Laffan, S.W. (eds), 10th International Conference on GeoComputation, UNSW, Sydney, November-December, 2009. pp114-119. paper
Kennedy, D.M., B. P. Brooke, C. D. Woodroffe, B. G. Jones3, C. Waikari and S. 5 Nichol. (submitted) The geomorphology of the flanks of the Lord Howe Island volcano, Tasman Sea, Australia. Deep Sea Research II
Lavers, J.L., C. Wilcox, C.J. Donlan. (in press). Are the demographic benefits resulting from predator removal sufficient to restore declining bird populations? Conservation Biology
Lucieer, V.L and Lucieer, A (2009) Fuzzy Clustering for Seafloor Classification. Marine Geology. 264, 230-241. doi:10.1016/j.margeo.2009.06.006 abstract
Lucieer, V. and Pederson, H. 2008. Linking morphometric characterisation of rocky reef with fine scale lobster movement. ISPRS Journal of Photogrammetry and Remote Sensing: Theme Issue Remote Sensing of Coastal Ecosystems. Vol 63: 485-590. doi:10.1016/j.isprsjprs.2008.01.003 abstract
Lyne, V.D., White, W.T., Gledhill, D.C., Last, P.R., Rees, T. & Porter-Smith, R. 2009. Analysis of Australian Continental Shelf Provinces and Biomes Based on Fish Data. CSIRO Marine and Atmospheric Research, Hobart, 40pp. open access
McArthur, M. Brooke, B., Przeslawski, R., Ryan, D.A., Lucieer, V.L., Nichol, S., McCallum, A.W., Mellin, C., Cresswell, I.D., Radke, L.C. 2009. A review of abiotic surrogates for marine benthic biodiversity. Geoscience Australia Record 2009/42.
McCallum, A.W. and Poore, G.C.B. (2010). Two crested and colourful new species of Lebbeus (Crustacea: Caridea: Hippolytidae) from the continental margin of Western Australia. Zootaxa 2372: 157-168 abstract
Mandel, J.T., Donlan, C.J., Wilcox, C., Cudney-Bueno, R., Pascoe, S. and Tulchin, D. (2009). Debt investment as a tool for value transfer in biodiversity conservation. Conservation Letters. doi:10.1111/j.1755-263X.2009.00070.x abstract
Mellin, C., Bradshaw, C.J.A., Meekan, M.G. and Caley, M.J. (2010). Environmental and spatial predictors of species richness and abundance in coral reef fishes Global Ecology and Biogeography 19, 212-222. doi:10.1111/j.1466-8238.2009.00513.x abstract
Mellin C, Caley M J, Meekan M G, Williams A, Dunstan P, Edgar G J, Przeslawski R, Pitcher CR, Bradshaw CJA (Submitted) Determining the effectiveness of biological surrogates for predicting biodiversity patterns. Ecological Applications.
Nichol, S. Anderson, T.J., McArthur, M., Barrett, N., Heap, A.D., Siwabessy, J., Brooke, B. 2009. Southeast Tasmania temperate reef survey: post survey report. Geoscience Australia Record 2009/43.
Pascoe, S., R. Bustamante, C. Wilcox and M. Gibbs. 2009. Spatial fisheries management: a framework for multi-objective qualitative assessment. Ocean and Coastal Management 52:130-138. doi:10.1016/j.ocecoaman.2008.10.009 abstract
Pascoe, W., W. Proctor, C. Wilcox, J. Innes, W. Rochester and N. Dowling (2009). Stakeholder objective preferences in Australian Commonwealth managed fisheries. Marine Policy. doi:10.1016/j.marpol.2009.02.008 abstract
Pascoe, S., W. Proctor, C. Wilcox, J. Innes, W. Rochester1 and N. Dowling. (in press). Stakeholder objective preferences in Australian Commonwealth managed fisheries. Socio-Economics and the Environment in Discussion working paper series. http://www.csiro.au/resources/SEED.html
Pitcher, C.R., P.J., Doherty, and T.J. Anderson. (2008). Seabed environments, habitats and biological assemblages. pages 51-58. In: Hutchings, P.A., M.J. Kingsford, and O. Hoegh-Guldberg (eds.). The Great Barrier Reef: Biological, Environment and Management. CSIRO Publishing, Springer. http://www.publish.csiro.au/pid/5921.htm
Poore, G.C.B. and Collins, D.J. 2009. Australian Axiidae (Crustacea: Decapoda: Axiidea). Memoirs of Museum Victoria 66: 221–287.
Poore, G.C.B., McCallum, A.S., and Taylor, J. (2008.) Decapod Crustacea of the continental margin of southwestern and central Western Australia: preliminary identifications of 524 species from FRV Southern Surveyor voyage SS10-2005. Museum Victoria Science Reports 11: 1–106.
Post, A.L. (2008.) The application of physical surrogates to predict the distribution of marine benthic organisms. Ocean & Coastal Management, Volume 51, Issue 2, 2008, Pages 161-179. doi:10.1016/j.ocecoaman.2007.04.008 abstract
Przeslawski R., and McArthur, M.A. (2009.) Novel method to concurrently sample the planktobenthos and benthos. Limnol. Oceanogr.: Methods 7, 2009, 823–832. paper
Przeslawski R, Zhu Q, Aller RA. (2009.) Effects of abiotic stressors on infaunal burrowing and associated sediment characteristics. Marine Ecology Progress Series. doi:10.3354/meps08221 abstract
Przeslawski, R., Ahyong, S., Byrne, M., Worheide, G., and Hutchings, P. (2008.) Beyond corals and fish: the effects of climate change on noncoral benthic invertebrates of tropical reefs. Global Change Biology (2008) 14, 2773–2795. doi:10.1111/j.1365-2486.2008.01693.x abstract
Przeslawski R, Radke L, Hughes M. 2009. Temporal and fine-scale variation in the biogeochemistry of Jervis Bay: Jervis Bay Post-Survey Report. GA Record 2009/12. Geoscience Australia: Canberra. 38 pp. report
Richer de Forges, B., and Poore, G.C.B. 2008. Deep-sea majoid crabs of the genera Oxypleurodon and Rochinia (Crustacea: Decapoda: Brachyura: Epialtidae) mostly from the continental margin of Western Australia. Memoirs of Museum Victoria 65: 63–70. abstract
Rowden, A.A.,T.A. Schlacher, A. Williams, M.R. Clark, R. Stewart, F. Althaus, D.A. Bowden, M. Consalvey, W. Robinson, J. Dowdney. (submitted). Do deep-sea seamounts support higher epibenthic megafauna biomass than slopes? Marine Ecology
Steele, K., Y. Carmel, J. Cross, and C. Wilcox (2009). Uses and Misuses of Multi-Criteria Decision Analysis (MCDA) in Environmental Decision-Making. Risk Analysis 29:26-33. doi:10.1111/j.1539-6924.2008.01130.x abstract
Stuart-Smith RD, Stevenson DG, Frusher SD, Barrett NS, Crawford CM, Edgar GJ (2008) Spatial patterns in impacts of fishing on temperate rocky reefs: are fish abundance and mean size related to proximity to fisher access points? Journal of Experimental Marine Biology and Ecology. doi:10.1016/j.jembe.2008.08.002 abstract
Taylor, J. (2010). The sand shrimp genus Philocheras (Caridea: Crangonidae) from the continental margin of Western Australia including the description of a new species and a key to Australian species. Zootaxa 2372:1570168 abstract
Taylor, J. and Collins, D J. (2009). New records of the shrimp genus Lissosabinea (Caridea: Crangonidae) from Australia including descriptions of three new species and a key to world species. Memoirs of Museum Victoria 66: 175-187
Wilcox, C. and C.J. Donlan (in press). Fisheries Management Needs An Integrated Toolbox. Frontiers in Ecology and the Environment.
Wilcox, C. and C.J. Donlan. (2007.) Compensatory mitigation as a solution to fisheries bycatch – biodiversity conservation conflicts. Frontiers in Ecology and the Environment, 5: 325-331. doi: 10.1890/1540-9295(2007)5[325:CMAAST]2.0.CO;2 abstract
Wilcox, C and C.J. Donlan. (2007.) Compensatory mitigation for marine bycatch will do harm, not good – Reply. Frontiers in Ecology and the Environment, 7: 352-353. doi: 10.1890/1540-9295(2007)5[350:CMFMBW]2.0.CO;2
Williams, A., F. Althaus, P.K. Dunstan, G.C.B. Poore, N.J. Bax, R.J. Kloser and F.R. McEnnulty. (2010). Scales of habitat heterogeneity and megabenthos biodiversity on an extensive Australian continental margin (100-1,000m depths). Marine Ecology, Volume 31 Issue 1, 222-236 doi:10.1111/j.1439-0485.2009.00355.x abstract
Williams, A. and Bax, N. (in press). Remarks on “Comment on: Williams et al. (2009) Australia’s deep-water reserve network: implications of false homogeneity for classifying abiotic surrogates of biodiversity, ICES Journal of Marine Science, 66: 214-224.” By Peter T. Harris, Andrew D. Heap, Tara. J. Anderson, and Brendan Brooke. ICES Journal of Marine Science.
Williams, A., Bax, N., Kloser, R., Althaus, F., Barker, B. and Keith, G. 2009. Australia’s deep-water reserve network: implications of false homogeneity for classifying abiotic surrogates of biodiversity, ICES Journal of Marine Science, 66: 214-224 open access